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CAZyme Gene Cluster: MGYG000001378_3|CGC6

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001378_02119
Sensor histidine kinase RcsC
TC 694386 696206 + 2.A.21.9.2
MGYG000001378_02120
Vitamin B12 import ATP-binding protein BtuD
TC 696242 697696 - 3.A.1.131.2
MGYG000001378_02121
Extracellular xylan exo-alpha-(1->2)-glucuronosidase
CAZyme 697804 699942 - GH67
MGYG000001378_02122
Xylosidase/arabinosidase
CAZyme 699980 700957 - GH43| 3.2.1.37| GH43_1| 3.2.1.55
MGYG000001378_02123
Endo-1,4-beta-xylanase A
CAZyme 700984 702114 - GH10
MGYG000001378_02124
Glucuronide carrier protein
TC 702154 703569 - 2.A.2.3.2
MGYG000001378_02125
hypothetical protein
null 703586 705244 - SASA| Glyco_hydro_2_N| SASA
MGYG000001378_02126
hypothetical protein
CAZyme 705577 707799 - GH10| CBM4
MGYG000001378_02127
hypothetical protein
null 707824 709227 - SGBP_B_XBD
MGYG000001378_02128
SusD-like protein
null 709242 710888 - SusD-like_3| SusD_RagB
MGYG000001378_02129
TonB-dependent receptor SusC
TC 710908 714081 - 1.B.14.6.1
MGYG000001378_02130
Sensor histidine kinase RcsC
TF 714477 718610 + HTH_AraC+HTH_AraC
MGYG000001378_02131
Pullulanase
CAZyme 718691 720691 - GH13| GH13_14| CBM48
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is xylan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001378_02121 GH67_e0|3.2.1.139|3.2.1.131|3.2.1.- xylan
MGYG000001378_02122 GH43_e85|3.2.1.55|3.2.1.37 xylan
MGYG000001378_02123 GH10_e61
MGYG000001378_02126 GH10_e47|CBM4_e10|3.2.1.8 xylan
MGYG000001378_02131 GH13_e146|CBM48_e5|3.2.1.41 starch

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig


Genomic location